The detailed information of tRNA gene sequence


Sequence ID>W131213901
Genome IDATTJ01000001
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus ficus 2009 [ATTJ]
Start position on genome 1577076
End posion on genome 1576987
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accttttcgc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGAATGGGTCGGTCTCGAAAACCGAAGTACGGGCAACCGTA
CCGTGGGTTCGAATCCCACCCTCTTCGCCA
Downstream region at tRNA end position 
acgccacacc
Secondary structure (Cloverleaf model)
>W131213901	Ser	CGA
                   c      GCCA acgccacacc
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     AGTACGGGCAACCGTACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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