The detailed information of tRNA gene sequence


Sequence ID>W1711414469
Genome IDMGZM01000221
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesGeobacteraceae bacterium GWF2_54_21 [MGZM]
Start position on genome 20855
End posion on genome 20758
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gttgctatac
tRNA gene sequence 
GGAAGAACAACGGTCGCTGGTGGGCCGCCCGGTCTTCAAAACCGGTGAGGGGGATGAGAA
ATCTCCCTGGTGGGTTCGATTCCCATGTTCTTCCGCCA
Downstream region at tRNA end position 
ataatatttt
Secondary structure (Cloverleaf model)
>W1711414469	SeC(p)	TCA
                   c      GCCA ataatatttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T
                     C - G          T T
                    A     T A C C C     A
      C G C        A      + | | | |     G
    T       T G G C       G T G G G     C
    G       + | | |                 T T
    G       G C C G
      T G G        C     TGAGGGGGATGAGAAATCTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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