The detailed information of tRNA gene sequence


Sequence ID>W1711415094
Genome IDMHAF01000128
Search identical group
Phylum/ClassIgnavibacteriota
SpeciesIgnavibacteria bacterium RBG_16_34_14 [MHAF]
Start position on genome 3995
End posion on genome 3908
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaacctcttt
tRNA gene sequence 
GGAAAGGTGCAGGAGTGGTTGAACTGGCACGCCTGGAGAGCGTGTGTACGTTAACGCGTA
CCGAGGGTTCGAATCCCTCCCTTTCCGCtc
Downstream region at tRNA end position 
aaaattatct
Secondary structure (Cloverleaf model)
>W1711415094	Ser	GGA
                   t      GCtc aaaattatct
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G A G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TGTACGTTAACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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