The detailed information of tRNA gene sequence


Sequence ID>W1711415106
Genome IDMHAF01000173
Search identical group
Phylum/ClassIgnavibacteriota
SpeciesIgnavibacteria bacterium RBG_16_34_14 [MHAF]
Start position on genome 30124
End posion on genome 30037
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatgaattc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTTGAATGCGGCGGTCTTGAAAACCGTTAAGGATGTAAGTCCT
TCCGGGGTTCGAATCCCTGTCTCTCCGCtc
Downstream region at tRNA end position 
agagaaaata
Secondary structure (Cloverleaf model)
>W1711415106	Ser	TGA
                   c      GCtc agagaaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAAGGATGTAAGTCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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