The detailed information of tRNA gene sequence


Sequence ID>W1711415192
Genome IDMHAL01000111
Search identical group
Phylum/ClassIgnavibacteriota
SpeciesIgnavibacteria bacterium RIFOXYA12_FULL_35_25 [MHAL]
Start position on genome 131388
End posion on genome 131299
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caacataatt
tRNA gene sequence 
GGAGAGATGCTAGAGTGGTTGAATAGGCCGGTCTCGAAAACCGGTGTAGGGTTTACTCTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
tttatatctc
Secondary structure (Cloverleaf model)
>W1711415192	Ser	CGA
                   t      GCAA tttatatctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G A G G G     C
    G         | | |                 T T
    T       A T A G
      T G A        G     TGTAGGGTTTACTCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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