The detailed information of tRNA gene sequence


Sequence ID>W1711415298
Genome IDMHAO01000221
Search identical group
Phylum/ClassIgnavibacteriota
SpeciesIgnavibacteria bacterium RIFOXYA2_FULL_35_9 [MHAO]
Start position on genome 187
End posion on genome 111
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cttcattcta
tRNA gene sequence 
GGCGCGTTCGTCTAGTGGCTTAGGACACCGCCCTCTCAAGGCGGGGATCACGGGTTCGAA
TCCCGTACGCGCTACAA
Downstream region at tRNA end position 
agatggctta
Secondary structure (Cloverleaf model)
>W1711415298	Glu	CTC
                   a      ACAA agatggctta
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      T T A        A     GGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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