The detailed information of tRNA gene sequence


Sequence ID>W1711415346
Genome IDMHAQ01000118
Search identical group
Phylum/ClassIgnavibacteriota
SpeciesStygiobacter sp. RIFOXYA2_FULL_38_8 RIFOXYA2_FULL_38_8 [MHAQ]
Start position on genome 34924
End posion on genome 34835
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtttttgact
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTTGAATGCGGCGGTCTTGAAAACCGTTAAGGATGTAAGTCCT
TCCGGGGTTCGAATCCCTGACTCTCCGCTA
Downstream region at tRNA end position 
aaggcttaaa
Secondary structure (Cloverleaf model)
>W1711415346	Ser	TGA
                   t      GCTA aaggcttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAAGGATGTAAGTCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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