The detailed information of tRNA gene sequence


Sequence ID>W1711415351
Genome IDMHAQ01000144
Search identical group
Phylum/ClassIgnavibacteriota
SpeciesStygiobacter sp. RIFOXYA2_FULL_38_8 RIFOXYA2_FULL_38_8 [MHAQ]
Start position on genome 18252
End posion on genome 18163
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatctttaat
tRNA gene sequence 
GGAGAGTTGCAGGAGTGGTTGATCTGGCTTCCCTGGAAAGGAAGTGTACCCGCAAGGGTA
CCGAGGGTTCGAATCCCTCACTCTCCTCAA
Downstream region at tRNA end position 
gtattttgct
Secondary structure (Cloverleaf model)
>W1711415351	Ser	GGA
                   t      TCAA gtattttgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G A G G G     C
    G       + | | |                 T T
    T       T C T G
      T G A        G     TGTACCCGCAAGGGTACC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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