The detailed information of tRNA gene sequence


Sequence ID>W131231879
Genome IDAUIU01000016
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio thiophilus DSM 17215 [AUIU]
Start position on genome 129593
End posion on genome 129517
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ataactgaaa
tRNA gene sequence 
CGGGGTGTAGCGCAGTCTGGTAGCGCACACGGTTCGGGACCGTGGTGTCGGAGGTTCAAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tacgatactt
Secondary structure (Cloverleaf model)
>W131231879	Pro	CGG
                   a      ACCA tacgatactt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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