The detailed information of tRNA gene sequence


Sequence ID>W1711416092
Genome IDMHBM01000289
Search identical group
Phylum/ClassLentisphaerota
SpeciesLentisphaerae bacterium RIFOXYA12_FULL_48_11 [MHBM]
Start position on genome 16563
End posion on genome 16659
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtgtaattat
tRNA gene sequence 
GGGAGTGAAAAGGTACCTGGTGGGCCTCCTGGACTTCAAATCCAGTGTGGGGCTTTAAAC
GGTCCCGGTTGGGTTCGATTCCCACTCACTCCCGCCA
Downstream region at tRNA end position 
tttgttatat
Secondary structure (Cloverleaf model)
>W1711416092	SeC(p)	TCA
                   t      GCCA tttgttatat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T T
                    A     C A C C C     A
      C C A        A        | | | |     G
    T       T G G A       T T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCTTTAAACGGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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