The detailed information of tRNA gene sequence


Sequence ID>W1711416579
Genome IDMHDT01000010
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium GWA2_46_11 [MHDT]
Start position on genome 45647
End posion on genome 45558
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatttttta
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGTGCACGACTGGAAATCGTGTGTGGGGTTAAACTCA
CCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttctac
Secondary structure (Cloverleaf model)
>W1711416579	Ser	GGA
                   a      GCCA ttttttctac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | +                 T T
    C       A G G T
      T T A        G     TGTGGGGTTAAACTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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