The detailed information of tRNA gene sequence


Sequence ID>W1711417081
Genome IDMHEJ01000034
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium RBG_16_43_8 [MHEJ]
Start position on genome 1097
End posion on genome 1003
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actatttttt
tRNA gene sequence 
GGAGAGGTGGCCGAGCAGGTCGAAGGCGGCGGTTTGCTAAACCGTTGTAGGGGCCAAAAC
CTCTACCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
gtgatcagaa
Secondary structure (Cloverleaf model)
>W1711417081	Ser	GCT
                   t      GCCA gtgatcagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    A C G A        G      | | | | |     G
  G         G C C G       C A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TGTAGGGGCCAAAACCTCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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