The detailed information of tRNA gene sequence


Sequence ID>W1711417147
Genome IDMHEW01000007
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium RIFOXYA2_FULL_44_9 [MHEW]
Start position on genome 20962
End posion on genome 21038
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttttgcctt
tRNA gene sequence 
GGGGTGGTAGTTCAGCTGGTTAGAACGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGAG
CCCCGTCCACCCCGCCA
Downstream region at tRNA end position 
tacctttggg
Secondary structure (Cloverleaf model)
>W1711417147	Asp	GTC
                   t      GCCA tacctttggg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          C G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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