The detailed information of tRNA gene sequence


Sequence ID>W1711417322
Genome IDMHFD01000086
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium RBG_13_46_9 [MHFD]
Start position on genome 6188
End posion on genome 6277
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acgaaaattc
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTTGAATGCGGCGGTCTCGAAAACCGTTGTGCCCTTTTGGGTA
CCGGAGGTTCGAATCCTCCACTCTCCGCCA
Downstream region at tRNA end position 
tccgccaaaa
Secondary structure (Cloverleaf model)
>W1711417322	Ser	CGA
                   c      GCCA tccgccaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C T C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G A G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGTGCCCTTTTGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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