The detailed information of tRNA gene sequence


Sequence ID>W1711417333
Genome IDMHFU01000056
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium RIFOXYB12_FULL_50_7 [MHFU]
Start position on genome 12778
End posion on genome 12866
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaaaatttt
tRNA gene sequence 
GGAGAGGTCGCATAGCCTGGTTTAGTGCGCTCGCCTGGAAAGCGGGTAGGCCAAAAGCCT
CGCGAGTTCGAATCTCGCCCTCTCCGCCA
Downstream region at tRNA end position 
taattttttc
Secondary structure (Cloverleaf model)
>W1711417333	Ser	GGA
                   t      GCCA taattttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
    C C G A        C      | | | | |     G
  T         T A C G       G C G A G     C
  G         + | | |                 T T
  G         G T G C
    T T T A        G     TAGGCCAAAAGCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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