The detailed information of tRNA gene sequence


Sequence ID>W1711419406
Genome IDMHPJ01000026
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_37_44 [MHPJ]
Start position on genome 3433
End posion on genome 3518
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacccaatta
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTTTAAAGGAGCTGGTTGCTAACCAGCGCCCCTTCGGGGGCTC
GTGGGTTCAAATCCCACCCTCTCCGCag
Downstream region at tRNA end position 
tcgccctcgt
Secondary structure (Cloverleaf model)
>W1711419406	Ser	GCT
                   a      GCag tcgccctcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      T T A        A     GCCCCTTCGGGGGCTC
                    G - C
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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