The detailed information of tRNA gene sequence


Sequence ID>W1711420288
Genome IDMHTL01000008
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Vogelbacteria bacterium RIFOXYD1_FULL_51_18 [MHTL]
Start position on genome 11647
End posion on genome 11719
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttctctttt
tRNA gene sequence 
GGGCCTATAGTTTCAATGGTAAAACGGCGGTCTCCAAAACCGTAGTTCGAGGTTCGACTC
CTCGTGGGCCCGCag
Downstream region at tRNA end position 
ctatacccac
Secondary structure (Cloverleaf model)
>W1711420288	Trp	CCA
                   t      GCag ctatacccac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     G C T C C     A
      A A C        A      | | | | |     G
    T       T T T G       C G A G G     C
    G       | | | |                 T T
    G       A A A C
      T A          G     AGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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