The detailed information of tRNA gene sequence


Sequence ID>W1711421452
Genome IDMHYM01000121
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium RBG_16_64_10 [MHYM]
Start position on genome 3263
End posion on genome 3164
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtggcatcc
tRNA gene sequence 
GGAGGTGCAAGCACACCTGGTGGTGGCCGCGGTCTTCAAAACCGTTGGGCTGCAAGTCAA
GCTTGCGGCCGGTCGGTTCGATTCCGACGCACTTCCGCCA
Downstream region at tRNA end position 
tcttgtcggc
Secondary structure (Cloverleaf model)
>W1711421452	SeC	TCA
                   c      GCCA tcttgtcggc
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    A     C A G C C     A
      C C A        A      | | | | |     G
    T       C A C G       G T C G G     C
    G           | |                 T T
    G       T G G C
      T G G        C     TGGGCTGCAAGTCAAGCTTGCGGCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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