The detailed information of tRNA gene sequence


Sequence ID>W1711421546
Genome IDMHZE01000832
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetes bacterium RIFOXYD12_FULL_42_12 [MHZE]
Start position on genome 2816
End posion on genome 2892
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attaaactca
tRNA gene sequence 
GGGGCCGTAGCTCAATTGGTTAGAGTACCAGACTGTCGATCTGGATGTTGCGGGTTCGAG
TCCCGTCGGCCTCGCCA
Downstream region at tRNA end position 
ttttatgtaa
Secondary structure (Cloverleaf model)
>W1711421546	Asp	GTC
                   a      GCCA ttttatgtaa
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     ATGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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