The detailed information of tRNA gene sequence


Sequence ID>W131168553
Genome IDAREC01000032
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 47253
End posion on genome 47327
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attccggcac
tRNA gene sequence 
GGGCGATTAACTCAGTGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAAATC
CAGTATCGCCCATCA
Downstream region at tRNA end position 
ataacttctt
Secondary structure (Cloverleaf model)
>W131168553	Val	CAC
                   c      ATCA ataacttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     A
      T     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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