The detailed information of tRNA gene sequence


Sequence ID>W1711421992
Genome IDMIAN01000172
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium GWB1_27_13 [MIAN]
Start position on genome 28012
End posion on genome 27922
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gataacgacT
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTCGAATCGGACTCCCTGCTAAGGAGTTGTACTCTTAAACGGG
TACCAAGGGTTCGAATCCCTTCCTCTCCGTtt
Downstream region at tRNA end position 
ttttatttat
Secondary structure (Cloverleaf model)
>W1711421992	Ser	GCT
                   T      GTtt ttttatttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A G C       A A G G G     C
    G         | | |                 T T
    T       A T C G
      C G A        G     TGTACTCTTAAACGGGTACC
                    A - T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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