The detailed information of tRNA gene sequence


Sequence ID>W1711422732
Genome IDMIBJ01000005
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium RBG_16_49_21 [MIBJ]
Start position on genome 9311
End posion on genome 9402
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tattagattG
tRNA gene sequence 
GGAAGAGGATGGGATCCGGTGGTCCCCGCGGTCTTCAAAACCGTTGGCTGTGATTTATCG
CAGCGGCAGGTTCGATTCCTGCCCCTTCCGCat
Downstream region at tRNA end position 
ggaagacaag
Secondary structure (Cloverleaf model)
>W1711422732	SeC(p)	TCA
                   G      GCat ggaagacaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A   C
                     G - C          T T
                    G     C G T C C     A
      C T A        A      | | | | |     G
    C       G G G T       G C A G G     C
    G       + | |                   T T
    G       T C C C
      T G G        C     TGGCTGTGATTTATCGCAGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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