The detailed information of tRNA gene sequence


Sequence ID>W1711422735
Genome IDMIBJ01000013
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium RBG_16_49_21 [MIBJ]
Start position on genome 4154
End posion on genome 4066
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggctcaataT
tRNA gene sequence 
GGAGAGATGCCCGAGTTGGTCGAAGGGGACGGTCTCGAAAATCGTTGTGGGCTTTGCTCA
CCGAGGGTTCGAATCCCTCTCTCTCCGAtg
Downstream region at tRNA end position 
cagatgatag
Secondary structure (Cloverleaf model)
>W1711422735	Ser	CGA
                   T      GAtg cagatgatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C C       G A G G G     C
  G           | | |                 T T
  T         A G G G
    C G A          G     TGTGGGCTTTGCTCACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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