The detailed information of tRNA gene sequence


Sequence ID>W1711422770
Genome IDMIBJ01000082
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium RBG_16_49_21 [MIBJ]
Start position on genome 60598
End posion on genome 60523
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcatatttaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTTTGGTTAGAGTACCTGCCTGTCACGCAGGGAGTCGCGGGTTCGA
GTCCCGTCAGCCCCGCtt
Downstream region at tRNA end position 
tgatattccc
Secondary structure (Cloverleaf model)
>W1711422770	Asp	GTC
                   a      GCtt tgatattccc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T C G       G C G G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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