The detailed information of tRNA gene sequence


Sequence ID>W1711422823
Genome IDMIBL01000606
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium RIFOXYB1_FULL_32_8 [MIBL]
Start position on genome 4348
End posion on genome 4260
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position 
atagaatttT
tRNA gene sequence 
GGAGAGCTGTCTGAGTGGTTGAAAGAGGCGGTCTTGAAAACCGTTGTGGTCGCGAGGCTA
CCTGGGGTTCGAATCCCTAGCTCTCCGTtt
Downstream region at tRNA end position 
ttttatcctt
Secondary structure (Cloverleaf model)
>W1711422823	Pseudo	TGA
                   T      GTtt ttttatcctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G T C T       T G G G G     C
    G         | | |                 T T
    T       A A G A
      T G A        G     TGTGGTCGCGAGGCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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