The detailed information of tRNA gene sequence


Sequence ID>W1711423197
Genome IDMICM01000815
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacterales bacterium RIFOXYC2_FULL_60_23 [MICM]
Start position on genome 94
End posion on genome -1
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tggtaactgc
tRNA gene sequence 
GGAAGTGCGAGGTTCACTGGTGGGGCCCCCGGACTTCAAATCCGGTGTGCCGTCTGCTGA
AGGCGGTAGGTGGGTTCGATTCCCATGCACTTCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>W1711423197	SeC(p)	TCA
                   c      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A C        A      + | | | |     G
    T       T T G G       G T G G G     C
    G       + + | |                 T T
    G       G G C C
      T G G        C     TGTGCCGTCTGCTGAAGGCGGTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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