The detailed information of tRNA gene sequence


Sequence ID>W1711423935
Genome IDMIDN01000080
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. RIFOXYC1_FULL_61_9 [MIDN]
Start position on genome 15925
End posion on genome 15853
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgcgttgc
tRNA gene sequence 
GGCGGCATAGCTCAGTTGGTAGAGCAAACGGCTCATATCCGTTCGGTCATAGGTTCAAAT
CCTATTGCCGCTAttc
Downstream region at tRNA end position 
gaggcccccg
Secondary structure (Cloverleaf model)
>W1711423935	Met	CAT
                   c      Attc gaggcccccg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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