The detailed information of tRNA gene sequence


Sequence ID>W1711423937
Genome IDMIDN01000093
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. RIFOXYC1_FULL_61_9 [MIDN]
Start position on genome 4399
End posion on genome 4471
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagatgcacc
tRNA gene sequence 
GGGCCTATAGCTCAGCGGTCAGAGCTGCGGACTCATAATCCGTAGGTCCCTGGTTCAAAT
CCAGGTGGGCCCAata
Downstream region at tRNA end position 
aataacgcga
Secondary structure (Cloverleaf model)
>W1711423937	Met	CAT
                   c      Aata aataacgcga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G G A C C     A
      C G A        A      | | | | |     A
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          T     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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