The detailed information of tRNA gene sequence


Sequence ID>W1711423938
Genome IDMIDN01000096
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. RIFOXYC1_FULL_61_9 [MIDN]
Start position on genome 10936
End posion on genome 10865
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccggcgatc
tRNA gene sequence 
GGCGCCGTACCCAAGCGGTAAGGGAGAGGTCTGCAAAACCTTTATGCGACAGTTCGATTC
TGTCCGGCGCCTttt
Downstream region at tRNA end position 
tttttaagcc
Secondary structure (Cloverleaf model)
>W1711423938	Cys	GCA
                   c      Tttt tttttaagcc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     C T G T C     A
        G A        A      | | | | |     G
      C     A C C C       G A C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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