The detailed information of tRNA gene sequence


Sequence ID>W1711423944
Genome IDMIDN01000110
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. RIFOXYC1_FULL_61_9 [MIDN]
Start position on genome 6808
End posion on genome 6895
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcccttcttT
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGAAGGTGTACGCTTGGAAAGCGTATGTGCCCAAAAGGTAC
CGAGGGTTCGAATCCCTCTCTCTCCGTtt
Downstream region at tRNA end position 
ttaattaccc
Secondary structure (Cloverleaf model)
>W1711423944	Ser	GGA
                   T      GTtt ttaattaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      C G A        G     TGTGCCCAAAAGGTACC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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