The detailed information of tRNA gene sequence


Sequence ID>W1711423948
Genome IDMIDN01000181
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. RIFOXYC1_FULL_61_9 [MIDN]
Start position on genome 5924
End posion on genome 5999
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ataaggaaaT
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGCGACGGACTTCGAATCCGTAGGTCGCAGGTTCGAC
TCCTGTCGGACGCAAgt
Downstream region at tRNA end position 
tgatggtttt
Secondary structure (Cloverleaf model)
>W1711423948	Arg	TCG
                   T      AAgt tgatggtttt
                     G - C
                     C - G
                     G - C
                     C   A
                     C - G
                     C - G
                     G - C          T C
                    T     T G T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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