The detailed information of tRNA gene sequence


Sequence ID>W1711423959
Genome IDMIDN01000259
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema sp. RIFOXYC1_FULL_61_9 [MIDN]
Start position on genome 32652
End posion on genome 32581
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aatatcttcc
tRNA gene sequence 
GGCCCCTTAGTCTATCGGTTAGGACATGAGATTCTCAATCTTAAAAGAGGGGTTCGACTC
CCCTAGGGGCTAata
Downstream region at tRNA end position 
aagagaagca
Secondary structure (Cloverleaf model)
>W1711423959	Glu	CTC
                   c      Aata aagagaagca
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T C C C C     A
      C T A        A      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    T - A
                    G + T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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