The detailed information of tRNA gene sequence


Sequence ID>W1711425061
Genome IDMIEP01000004
Search identical group
Phylum/ClassMycoplasmatota
SpeciesRice orange leaf phytoplasma [MIEP]
Start position on genome 49259
End posion on genome 49346
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgggcttttt
tRNA gene sequence 
GGAGGAATACTCAAGTGGCCGAAGAGGCACGCTTGGAAAGCGTGTAGATCCAAAAGATGC
GAGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
actaaaatta
Secondary structure (Cloverleaf model)
>W1711425061	Ser	GGA
                   t      GCCA actaaaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      C G A        G     TAGATCCAAAAGATGC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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