The detailed information of tRNA gene sequence


Sequence ID>W131193569
Genome IDASOO01000021
Search identical group
Phylum/ClassUnclassified
SpeciesAminicenantes bacterium SCGC AAA252-J21 OP8 bacterium SCGC AAA252-J21 [ASOO]
Start position on genome 14688
End posion on genome 14764
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggacgttgc
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
tcttatttat
Secondary structure (Cloverleaf model)
>W131193569	Met	CAT
                   c      ACCA tcttatttat
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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