The detailed information of tRNA gene sequence


Sequence ID>W131168549
Genome IDAREC01000030
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 34196
End posion on genome 34268
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacacacga
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGT
CCTGCCCCTGCTAaat
Downstream region at tRNA end position 
acaggttctt
Secondary structure (Cloverleaf model)
>W131168549	Met	CAT
                   a      Aaat acaggttctt
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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