The detailed information of tRNA gene sequence


Sequence ID>W131231805
Genome IDAUIT01000002
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfobacterium hveragerdense DSM 12571 [AUIT]
Start position on genome 89754
End posion on genome 89661
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgaatttt
tRNA gene sequence 
GGAGGGGTGCCCGAGTGGACGAAGGGGTGCGACTGGAAATCGCATGTACGGGCTAAAACC
CGTACCGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
tccttttttc
Secondary structure (Cloverleaf model)
>W131231805	Ser	GGA
                   t      GCCA tccttttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    A       A G G G
      C G A        G     TGTACGGGCTAAAACCCGTACC
                    T - A
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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