The detailed information of tRNA gene sequence


Sequence ID>W131157316
Genome IDAQRZ01000027
Search identical group
Phylum/ClassSynergistota
SpeciesSynergistetes bacterium JGI 0000079-D21 [AQRZ]
Start position on genome 1217
End posion on genome 1141
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagttgaagc
tRNA gene sequence 
GGGGTTGTAGCTCAGTCGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCAGCCCCGCCA
Downstream region at tRNA end position 
aactgttttc
Secondary structure (Cloverleaf model)
>W131157316	Asp	GTC
                   c      GCCA aactgttttc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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