The detailed information of tRNA gene sequence


Sequence ID>W131223135
Genome IDAUBV01000005
Search identical group
Phylum/ClassBacteroidota
SpeciesAlgoriphagus mannitolivorans DSM 15301 [AUBV]
Start position on genome 308221
End posion on genome 308134
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gggaataatt
tRNA gene sequence 
AGAGGAGTGGCAGAGTGGTCGATCGCGGCGGTCTTGAAAACCGTTGTACCGAGAGGTACC
GGGGGTTCGAATCCCTCCTCCTCTGCAA
Downstream region at tRNA end position 
agcgtcaaaa
Secondary structure (Cloverleaf model)
>W131223135	Ser	TGA
                   t      GCAA agcgtcaaaa
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TGTACCGAGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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