The detailed information of tRNA gene sequence


Sequence ID>W131218163
Genome IDATXK01000037
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAurantimonas coralicida DSM 14790 [ATXK]
Start position on genome 6
End posion on genome 95
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnncggcc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACGTGCAAGCGTA
TCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
ttatatggct
Secondary structure (Cloverleaf model)
>W131218163	Ser	CGA
                   c      GCCA ttatatggct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CATACGTGCAAGCGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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