The detailed information of tRNA gene sequence


Sequence ID>W131164233
Genome IDARAK01000220
Search identical group
Phylum/ClassZetaproteobacteria
Specieszeta proteobacterium SCGC AB-137-C09 [ARAK]
Start position on genome 42017
End posion on genome 41928
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgagttcaac
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCTGAAAGCGCGCCCCTGCTAAGGGTGTATAGGCTAAAACCTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cttatcactg
Secondary structure (Cloverleaf model)
>W131164233	Ser	GCT
                   c      GCCA cttatcactg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATAGGCTAAAACCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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