The detailed information of tRNA gene sequence


Sequence ID>W131221822
Genome IDAUAU01000005
Search identical group
Phylum/ClassAcidobacteriota
SpeciesGeothrix fermentans DSM 14018 [AUAU]
Start position on genome 203536
End posion on genome 203612
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaaaaagcaa
tRNA gene sequence 
GGGGTTGTAGCTCAGTCGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
aaaagcgccc
Secondary structure (Cloverleaf model)
>W131221822	Asp	GTC
                   a      GCCA aaaagcgccc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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