The detailed information of tRNA gene sequence


Sequence ID>W131223106
Genome IDAUBU01000010
Search identical group
Phylum/ClassBacteroidota
SpeciesAlgoriphagus marincola DSM 16067 [AUBU]
Start position on genome 290513
End posion on genome 290604
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatgatatta
tRNA gene sequence 
AGAGAGTTGGGTGAGTGGCTTAAACCAGCAGTTTGCTAAACTGTCGTACGGGTCAAACCG
TACCGGGGGTTCGAATCCCCCACTCTCTGCAA
Downstream region at tRNA end position 
aattggtttt
Secondary structure (Cloverleaf model)
>W131223106	Ser	GCT
                   a      GCAA aattggtttt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGTCAAACCGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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