The detailed information of tRNA gene sequence


Sequence ID>W1711460778
Genome IDMJGC01000060
Search identical group
Phylum/ClassCyanobacteriota
SpeciesDesertifilum tharense IPPAS B-1220 [MJGC]
Start position on genome 47492
End posion on genome 47581
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaccccctT
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCGCAGCACTGGAAATGCTGTAACACCCGAAAGGTG
TTCGGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
tatccaggtt
Secondary structure (Cloverleaf model)
>W1711460778	Ser	GGA
                   T      GTtt tatccaggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAACACCCGAAAGGTGTTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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