The detailed information of tRNA gene sequence


Sequence ID>W1711460799
Genome IDMJGC01000088
Search identical group
Phylum/ClassCyanobacteriota
SpeciesDesertifilum tharense IPPAS B-1220 [MJGC]
Start position on genome 102036
End posion on genome 102118
Amino Acid Pseudo
Anticodon TAG
Upstream region at tRNA start position 
ttaaagagcG
tRNA gene sequence 
TACATACTCGCCGAATGGTATAGGCGCTTGATTTAGGTTCAAGTCCCGCAAGGGATGTGG
GTTCAACTCCCGCGTATGACCAaa
Downstream region at tRNA end position 
ccgctttttc
Secondary structure (Cloverleaf model)
>W1711460799	Pseudo	TAG
                   G      CAaa ccgctttttc
                     T   C
                     A   A
                     C - G
                     A - T
                     T - A
                     A - T
                     C - G          T C
                    T     C G C C C     A
      T A A        C      | + | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      A T          G     TCCCGCAAGGGAT
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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