The detailed information of tRNA gene sequence


Sequence ID>W1711460805
Genome IDMJGC01000099
Search identical group
Phylum/ClassCyanobacteriota
SpeciesDesertifilum tharense IPPAS B-1220 [MJGC]
Start position on genome 71965
End posion on genome 72041
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaaagccga
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGTGGTTCAAA
TCCGCTCCCCGCCACCA
Downstream region at tRNA end position 
aattccgata
Secondary structure (Cloverleaf model)
>W1711460805	Met	CAT
                   a      ACCA aattccgata
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C G C C     A
      T G A        A      | | + | |     A
    C       C G A G       A G T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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