The detailed information of tRNA gene sequence


Sequence ID>W1711475502
Genome IDMJUW02000019
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Brocadia sapporoensis sp. 40 [MJUW]
Start position on genome 11387
End posion on genome 11478
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcaagagta
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGATCGGGACGGTCTCGAAAACCGTTTCTCGCATAACAGCG
GGACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcaaaaacaa
Secondary structure (Cloverleaf model)
>W1711475502	Ser	CGA
                   a      GCCA gcaaaaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    T       T C G G
      T G A        G     TTCTCGCATAACAGCGGGAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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