The detailed information of tRNA gene sequence


Sequence ID>W1711475503
Genome IDMJUW02000019
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Brocadia sapporoensis sp. 40 [MJUW]
Start position on genome 11596
End posion on genome 11688
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caccggtatt
tRNA gene sequence 
GGAGAGGTGTCAGAGAGGCCGAATGAGCGCGCTTGGAAAGCGCGTATACCGACAAAATCG
GTATCGCGGGTTCGACTCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttatataa
Secondary structure (Cloverleaf model)
>W1711475503	Ser	GGA
                   t      GCCA gtttatataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G A C T       G C G G G     C
    G         | | |                 T T
    C       A T G A
      C G A        G     TATACCGACAAAATCGGTATC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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