The detailed information of tRNA gene sequence


Sequence ID>W1711501153
Genome IDMKRG01000102
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. 62-7 [MKRG]
Start position on genome 43384
End posion on genome 43289
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gagagcgttc
tRNA gene sequence 
GGAGGCGTTTAGGTTCCTGGTGGTCCTCCCGGTCTTCAAAACCGGTGAGACCGAGTACCT
CGGTCTGGCAGGTTCGATTCCTGTCCGCCTCCGCCA
Downstream region at tRNA end position 
atcgccgtaa
Secondary structure (Cloverleaf model)
>W1711501153	SeC(p)	TCA
                   c      GCCA atcgccgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G T C C     A
      C C T        T      + | | | |     G
    T       T G G A       G C A G G     C
    G         | | |                 T T
    G       T C C T
      T G G        C     TGAGACCGAGTACCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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