The detailed information of tRNA gene sequence


Sequence ID>W1711503214
Genome IDMKTJ01000080
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 54-19 [MKTJ]
Start position on genome 26258
End posion on genome 26346
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagcaattgc
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCCCGTCTCGAAAACGGGTAGAGCGCAAGTTCT
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtcataaaag
Secondary structure (Cloverleaf model)
>W1711503214	Ser	CGA
                   c      GCCA gtcataaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TAGAGCGCAAGTTCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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