The detailed information of tRNA gene sequence


Sequence ID>W1711573134
Genome IDMNCN01000069
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium 13_2_20CM_55_10 [MNCN]
Start position on genome 6622
End posion on genome 6714
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tccgcaatcg
tRNA gene sequence 
GGAGAGTGAAGGGTGCCTGGTGGCCCTCGCGGTCTTCAAAACCGTCGTCGCCGCGCAAGT
GGCGAGGTAGGTTCGATTCCTATCCTCTCCGCCt
Downstream region at tRNA end position 
cttcattttc
Secondary structure (Cloverleaf model)
>W1711573134	SeC(p)	TCA
                   g      GCCt cttcattttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     T A T C C     A
    C C G T        A      + | | | |     G
  T         G G G A       G T A G G     C
  G         | | | |                 T T
  G         C C C T
    T G G          C     CGTCGCCGCGCAAGTGGCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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